c****************************************************************************** c FILE: pgapackf.h c c Authors: David M. Levine, Philip L. Hallstrom, David M. Noelle, c Brian P. Walenz c*****************************************************************************/ c *** I/O FLAGS CBARF !! is NULL ok? integer STDIN, STDOUT, STDERR, NULL parameter(STDIN=5, STDOUT=6, STDERR=6, NULL=0) c *** ABSTRACT DATA TYPES integer PGA_DATATYPE_BINARY parameter( PGA_DATATYPE_BINARY = 1) integer PGA_DATATYPE_INTEGER parameter( PGA_DATATYPE_INTEGER = 2) integer PGA_DATATYPE_REAL parameter( PGA_DATATYPE_REAL = 3) integer PGA_DATATYPE_CHARACTER parameter( PGA_DATATYPE_CHARACTER = 4) integer PGA_DATATYPE_USER parameter( PGA_DATATYPE_USER = 5) integer PGA_INT parameter( PGA_INT = 1) integer PGA_DOUBLE parameter( PGA_DOUBLE = 2) integer PGA_CHAR parameter( PGA_CHAR = 3) integer PGA_VOID parameter( PGA_VOID = 4) c *** BOOLEANS & FLAGS integer PGA_TRUE parameter ( PGA_TRUE = 1) integer PGA_FALSE parameter ( PGA_FALSE = 0) integer PGA_FATAL parameter ( PGA_FATAL = 1) integer PGA_WARNING parameter ( PGA_WARNING = 2) integer PGA_UNINITIALIZED_INT parameter ( PGA_UNINITIALIZED_INT = -3827) double precision PGA_UNINITIALIZED_DOUBLE parameter ( PGA_UNINITIALIZED_DOUBLE = -968.3827) c *** TEMP & POP REFERENT CONSTANTS integer PGA_TEMP1 parameter ( PGA_TEMP1 = -1138) integer PGA_TEMP2 parameter ( PGA_TEMP2 = -4239) integer PGA_OLDPOP parameter ( PGA_OLDPOP = -6728) integer PGA_NEWPOP parameter ( PGA_NEWPOP = -8376) c *** DEBUG LEVELS integer PGA_DEBUG_ENTERED parameter ( PGA_DEBUG_ENTERED = 12) integer PGA_DEBUG_EXIT parameter ( PGA_DEBUG_EXIT = 13) integer PGA_DEBUG_MALLOC parameter ( PGA_DEBUG_MALLOC = 80) integer PGA_DEBUG_PRINTVAR parameter ( PGA_DEBUG_PRINTVAR = 82) integer PGA_DEBUG_SEND parameter ( PGA_DEBUG_SEND = 22) integer PGA_DEBUG_RECV parameter ( PGA_DEBUG_RECV = 23) integer PGA_DEBUG_MAXPGAPACKFUNCTIONS parameter ( PGA_DEBUG_MAXPGAPACKFUNCTIONS = 300) integer PGA_DEBUG_MAXFLAGS parameter ( PGA_DEBUG_MAXFLAGS = 1000) c *** DIRECTION integer PGA_MAXIMIZE parameter ( PGA_MAXIMIZE = 1) integer PGA_MINIMIZE parameter ( PGA_MINIMIZE = 2) c *** STOPPING CRITERIA integer PGA_STOP_MAXITER parameter ( PGA_STOP_MAXITER = 1) integer PGA_STOP_NOCHANGE parameter ( PGA_STOP_NOCHANGE = 2) integer PGA_STOP_TOOSIMILAR parameter ( PGA_STOP_TOOSIMILAR = 4) c *** CROSSOVER integer PGA_CROSSOVER_ONEPT parameter ( PGA_CROSSOVER_ONEPT = 1) integer PGA_CROSSOVER_TWOPT parameter ( PGA_CROSSOVER_TWOPT = 2) integer PGA_CROSSOVER_UNIFORM parameter ( PGA_CROSSOVER_UNIFORM = 3) c *** SELECTION integer PGA_SELECT_PROPORTIONAL parameter ( PGA_SELECT_PROPORTIONAL = 1) integer PGA_SELECT_SUS parameter ( PGA_SELECT_SUS = 2) integer PGA_SELECT_TOURNAMENT parameter ( PGA_SELECT_TOURNAMENT = 3) integer PGA_SELECT_PTOURNAMENT parameter ( PGA_SELECT_PTOURNAMENT = 4) c *** FITNESS integer PGA_FITNESS_RAW parameter ( PGA_FITNESS_RAW = 1) integer PGA_FITNESS_NORMAL parameter ( PGA_FITNESS_NORMAL = 2) integer PGA_FITNESS_RANKING parameter ( PGA_FITNESS_RANKING = 3) c *** FITNESS (MINIMIZATION) integer PGA_FITNESSMIN_RECIPROCAL parameter ( PGA_FITNESSMIN_RECIPROCAL = 1) integer PGA_FITNESSMIN_CMAX parameter ( PGA_FITNESSMIN_CMAX = 2) c *** MUTATION integer PGA_MUTATION_CONSTANT parameter ( PGA_MUTATION_CONSTANT = 1) integer PGA_MUTATION_RANGE parameter ( PGA_MUTATION_RANGE = 2) integer PGA_MUTATION_UNIFORM parameter ( PGA_MUTATION_UNIFORM = 3) integer PGA_MUTATION_GAUSSIAN parameter ( PGA_MUTATION_GAUSSIAN = 4) integer PGA_MUTATION_PERMUTE parameter ( PGA_MUTATION_PERMUTE = 5) c *** POPULATION REPLACEMENT integer PGA_POPREPL_BEST parameter ( PGA_POPREPL_BEST = 1) integer PGA_POPREPL_RANDOM_NOREP parameter ( PGA_POPREPL_RANDOM_NOREP = 2) integer PGA_POPREPL_RANDOM_REP parameter ( PGA_POPREPL_RANDOM_REP = 3) c *** REPORT OPTIONS integer PGA_REPORT_ONLINE parameter ( PGA_REPORT_ONLINE = 1 ) integer PGA_REPORT_OFFLINE parameter ( PGA_REPORT_OFFLINE = 2 ) integer PGA_REPORT_HAMMING parameter ( PGA_REPORT_HAMMING = 4 ) integer PGA_REPORT_STRING parameter ( PGA_REPORT_STRING = 8 ) integer PGA_REPORT_WORST parameter ( PGA_REPORT_WORST = 16 ) integer PGA_REPORT_AVERAGE parameter ( PGA_REPORT_AVERAGE = 32 ) c *** RANDOMIZER integer PGA_IINIT_PERMUTE parameter ( PGA_IINIT_PERMUTE = 1) integer PGA_IINIT_RANGE parameter ( PGA_IINIT_RANGE = 2) integer PGA_CINIT_LOWER parameter ( PGA_CINIT_LOWER = 1) integer PGA_CINIT_UPPER parameter ( PGA_CINIT_UPPER = 2) integer PGA_CINIT_MIXED parameter ( PGA_CINIT_MIXED = 3) c *** SET USER FUNCTION integer PGA_USERFUNCTION_CREATESTRING parameter ( PGA_USERFUNCTION_CREATESTRING = 1) integer PGA_USERFUNCTION_MUTATION parameter ( PGA_USERFUNCTION_MUTATION = 2) integer PGA_USERFUNCTION_CROSSOVER parameter ( PGA_USERFUNCTION_CROSSOVER = 3) integer PGA_USERFUNCTION_PRINTSTRING parameter ( PGA_USERFUNCTION_PRINTSTRING = 4) integer PGA_USERFUNCTION_COPYSTRING parameter ( PGA_USERFUNCTION_COPYSTRING = 5) integer PGA_USERFUNCTION_DUPLICATE parameter ( PGA_USERFUNCTION_DUPLICATE = 6) integer PGA_USERFUNCTION_INITSTRING parameter ( PGA_USERFUNCTION_INITSTRING = 7) integer PGA_USERFUNCTION_BUILDDATATYPE parameter ( PGA_USERFUNCTION_BUILDDATATYPE = 8) integer PGA_USERFUNCTION_STOPCOND parameter ( PGA_USERFUNCTION_STOPCOND = 9) integer PGA_USERFUNCTION_ENDOFGEN parameter ( PGA_USERFUNCTION_ENDOFGEN = 10) c *** TAGS integer PGA_COMM_STRINGTOEVAL parameter ( PGA_COMM_STRINGTOEVAL = 1) integer PGA_COMM_EVALOFSTRING parameter ( PGA_COMM_EVALOFSTRING = 2) integer PGA_COMM_DONEWITHEVALS parameter ( PGA_COMM_DONEWITHEVALS = 3) integer PGAGetBinaryAllele double precision PGAGetBinaryInitProb character PGAGetCharacterAllele integer PGACreate integer PGAGetRandomInitFlag integer PGAGetCrossoverType double precision PGAGetCrossoverProb double precision PGAGetUniformCrossoverProb integer PGADuplicate integer PGAGetNoDuplicatesFlag double precision PGAGetEvaluation integer PGAGetEvaluationUpToDateFlag double precision PGAGetRealFromBinary double precision PGAGetRealFromGrayCode integer PGAGetIntegerFromBinary integer PGAGetIntegerFromGrayCode integer PGARank double precision PGAGetFitness integer PGAGetFitnessType integer PGAGetFitnessMinType double precision PGAGetMaxFitnessRank double precision PGAGetFitnessCmaxValue double precision PGAHammingDistance integer PGAGetIntegerAllele integer PGAGetIntegerInitType integer PGAGetMinIntegerInitValue integer PGAGetMaxIntegerInitValue integer PGAMutate integer PGAGetMutationType double precision PGAGetMutationRealValue integer PGAGetMutationIntegerValue integer PGAGetMutationBoundedFlag double precision PGAGetMutationProb integer PGABuildDatatype integer PGAGetRank integer PGAGetNumProcs integer PGAGetCommunicator integer PGAGetDataType integer PGAGetOptDirFlag integer PGAGetStringLength integer PGAGetGAIterValue integer PGAGetMutationOrCrossoverFlag integer PGAGetMutationAndCrossoverFlag integer PGAGetPopSize integer PGAGetNumReplaceValue integer PGAGetPopReplaceType integer PGAGetSortedPopIndex integer PGARandomFlip integer PGARandomInterval double precision PGARandom01 double precision PGARandomUniform double precision PGARandomGaussian integer PGAGetRandomSeed double precision PGAGetRealAllele double precision PGAGetMinRealInitValue double precision PGAGetMaxRealInitValue integer PGAGetRealInitType integer PGAGetPrintFrequencyValue integer PGAGetRestartFlag integer PGAGetRestartFrequencyValue double precision PGAGetRestartAlleleChangeProb integer PGASelectNextIndex integer PGAGetSelectType double precision PGAGetPTournamentProb integer PGADone integer PGACheckStoppingConditions integer PGAGetStoppingRuleType integer PGAGetMaxGAIterValue integer PGAGetMaxMachineIntValue integer PGAGetMinMachineIntValue double precision PGAGetMaxMachineDoubleValue double precision PGAGetMinMachineDoubleValue double precision PGAMean double precision PGAStddev integer PGARound integer PGACheckSum integer PGAGetWorstIndex integer PGAGetBestIndex external PGAGetBinaryAllele external PGAGetBinaryInitProb external PGAGetCharacterAllele external PGACreate external PGAGetRandomInitFlag external PGAGetCrossoverType external PGAGetCrossoverProb external PGAGetUniformCrossoverProb external PGADuplicate external PGAGetNoDuplicatesFlag external PGAGetEvaluation external PGAGetEvaluationUpToDateFlag external PGAGetRealFromBinary external PGAGetRealFromGrayCode external PGAGetIntegerFromBinary external PGAGetIntegerFromGrayCode external PGARank external PGAGetFitness external PGAGetFitnessType external PGAGetFitnessMinType external PGAGetMaxFitnessRank external PGAGetFitnessCmaxValue external PGAHammingDistance external PGAGetIntegerAllele external PGAGetIntegerInitType external PGAGetMinIntegerInitValue external PGAGetMaxIntegerInitValue external PGAMutate external PGAGetMutationType external PGAGetMutationRealValue external PGAGetMutationIntegerValue external PGAGetMutationBoundedFlag external PGAGetMutationProb external PGABuildDatatype external PGAGetRank external PGAGetNumProcs external PGAGetCommunicator external PGAGetDataType external PGAGetOptDirFlag external PGAGetStringLength external PGAGetGAIterValue external PGAGetMutationOrCrossoverFlag external PGAGetMutationAndCrossoverFlag external PGAGetPopSize external PGAGetNumReplaceValue external PGAGetPopReplaceType external PGAGetSortedPopIndex external PGARandomFlip external PGARandomInterval external PGARandom01 external PGARandomUniform external PGARandomGaussian external PGAGetRandomSeed external PGAGetRealAllele external PGAGetMinRealInitValue external PGAGetMaxRealInitValue external PGAGetRealInitType external PGAGetPrintFrequencyValue external PGAGetRestartFlag external PGAGetRestartFrequencyValue external PGAGetRestartAlleleChangeProb external PGASelectNextIndex external PGAGetSelectType external PGAGetPTournamentProb external PGADone external PGACheckStoppingConditions external PGAGetStoppingRuleType external PGAGetMaxGAIterValue external PGAGetMaxMachineIntValue external PGAGetMinMachineIntValue external PGAGetMaxMachineDoubleValue external PGAGetMinMachineDoubleValue external PGAMean external PGAStddev external PGARound external PGACheckSum external PGAGetWorstIndex external PGAGetBestIndex