/* COPYRIGHT The following is a notice of limited availability of the code, and disclaimer which must be included in the prologue of the code and in all source listings of the code. (C) COPYRIGHT 2008 University of Chicago Permission is hereby granted to use, reproduce, prepare derivative works, and to redistribute to others. This software was authored by: D. Levine Mathematics and Computer Science Division Argonne National Laboratory Group with programming assistance of participants in Argonne National Laboratory's SERS program. GOVERNMENT LICENSE Portions of this material resulted from work developed under a U.S. Government Contract and are subject to the following license: the Government is granted for itself and others acting on its behalf a paid-up, nonexclusive, irrevocable worldwide license in this computer software to reproduce, prepare derivative works, and perform publicly and display publicly. DISCLAIMER This computer code material was prepared, in part, as an account of work sponsored by an agency of the United States Government. Neither the United States, nor the University of Chicago, nor any of their employees, makes any warranty express or implied, or assumes any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed, or represents that its use would not infringe privately owned rights. */ /***************************************************************************** * FILE: heap.c: This file contains routines for sorting individuals for * selection * * Authors: David M. Levine, Philip L. Hallstrom, David M. Noelle, * Brian P. Walenz *****************************************************************************/ #include /****************************************************************************** PGAAdjustHeap - Auxiliary routine called by PGA*HeapSort Category: Sorting Inputs: ctx - context variable a - array of values to be sorted idx - array of integer indices corresponding to the array a being sorted i - point of combination -- combine the node at a[i] with the two heaps at a[2i+1] and a[2i+2] to form a single heap. 0 <= i <= n-1. n - size of the arrays a and idx j - temporary variable, integer item - temporary variable, type must be same as a item_idx - temporary variable, integer Output: Example: ******************************************************************************/ #define PGAAdjustHeap(ctx, a, idx, i, n, j, item, item_idx) { \ item = a[i]; \ item_idx = idx[i]; \ j = 2*i+1; /* let j be the left child */ \ while (j < n) { \ if (j a[j+1]) \ j = j + 1; /* j is the larger child */ \ if (item <= a[j]) /* a position for item has been found */ \ break; \ a[(j-1)/2] = a[j]; /* move the larger child up a level */ \ idx[(j-1)/2] = idx[j]; \ j = j*2+1; \ } \ a[(j-1)/2] = item; \ idx[(j-1)/2] = item_idx; \ } \ /*I**************************************************************************** PGADblHeapSort - Uses a heapsort algorithm to sort from largest to smallest element. An integer array, intialized with the original indices of the elements of array a is sorted also so that the original locations are known Category: Sorting Inputs: ctx - context variable a - array of (double) values to be sorted idx - array of integer indices corresponding to the array a being sorted n - size of the arrays a and idx Output: The sorted arrays a and idx Example: The following code sorts the population by fitness PGAContext *ctx; int i,j,n,idx[LARGE] double a[LARGE]; : n = PGAGetPopsize(ctx); for(i=0;i=0; i--) PGAAdjustHeap(ctx, a, idx, i, n, j, item, item_idx); for ( i=n-1; i>=1; i--) /* interchange the new maximum with the */ { /* element at the end of the tree */ temp_a = a[i]; temp_idx = idx[i]; a[i] = a[0]; idx[i] = idx[0]; a[0] = temp_a; idx[0] = temp_idx; PGAAdjustHeap(ctx, a, idx, 0, i, j, item, item_idx); } PGADebugExited("PGADblHeapSort"); } /*I**************************************************************************** PGAIntHeapSort - Uses a heapsort algorithm to sort from largest to smallest element. An integer array, intialized with the original indices of the elements of array a is sorted also so that the original locations are known Category: Sorting Inputs: ctx - context variable a - array of (int) values to be sorted idx - array of integer indices corresponding to the array a being sorted n - size of the arrays a and idx Output: The sorted arrays a and idx Example: The following code sorts the population by fitness PGAContext *ctx; int i,j,n,idx[LARGE],a[LARGE]; : n = PGAGetPopsize(ctx); for(i=0;i=0; i--) PGAAdjustHeap(ctx, a, idx, i, n, j, item, item_idx); for ( i=n-1; i>=1; i--) /* interchange the new maximum with the */ { /* element at the end of the tree */ temp_a = a[i]; temp_idx = idx[i]; a[i] = a[0]; idx[i] = idx[0]; a[0] = temp_a; idx[0] = temp_idx; PGAAdjustHeap(ctx, a, idx, 0, i, j, item, item_idx); } PGADebugExited("PGAIntHeapSort"); }